Research groups

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This page lists all laboratories that joined the Metaproteomics Intitiative. Currently, 68 labs in 17 countries joined.

Australia

• Immunoproteomics laboratory (Monash University, Clayton), led by Prof. Anthony Purcell
• Type 1 diabetes pathogenesis and therapy (University of Queensland, Brisbane), led by Dr. Emma Hamilton-Williams

Austria

• Center for Microbiology and Environmental Systems Science (University of Vienna, Vienna), led by Prof. Wolfgang Wanek
• Institute of Soil Research (University of Natural Resources and Life Sciences, Vienna), led by Prof. Sophie Zechmeister-Boltenstern
• Systems Biology of Pain. Division of Pharmacology & Toxicology (University of Vienna, Vienna), led by Prof. Manuela Schmidt

Belgium

• CompOmics (Ghent University, Ghent), led by Prof. Lennart Martens
• Computational Biology Group (Ghent University, Ghent), led by Prof. Peter Dawyndt
• Proteomics and microbiology (University of Mons, Mons), led by Prof. Ruddy Wattiez

Canada

• Bioinformatics of Proteomics and Network Biology lab (Ottawa), led by Prof. Mathieu Lavallée-Adam
• Cellular immunology and mass spectrometry laboratory (Health Canada, Ottawa), led by Dr. Xu Zhang
• Energy Bioengineering Group (University of Calgary, Calgary), led by Dr. Marc Strous
• Northomics lab (University of Ottawa, Ottawa), led by Prof. Daniel Figeys

China

• Liu’s lab (University of Chinese Academy and Sciences, Shenzhen), led by Prof. Siqi Liu
• Rumen microbiome group (Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing), led by Prof. Shengguo Zhao
• Wastewater Treatment Biotechnology and Aquatic Environment Remediation (Nanjing University, Nanjing), led by Prof. Hongqiang Ren

Finland

• Computational Biomedicine (University of Turku, Turku), led by Prof. Laura Elo

France

• Micalis Institute (INRAE, AgroParisTech, Universite Paris-Saclay, Jouy-en-Josas), led by Catherine Juste
• PAPPSO proteomic facility (Paris), led by Céline Henry and Olivier Langella
• Phylogene Mass Spec lab and dedicated Bioinformatics (Nîmes), led by Mr. Gilbert Skorski
• ProGenoMix platform (CEA, Bagnols-sur-Cèze), led by Dr. Jean Armengaud
• Systems biology of microbial consortia (Toulouse Biotechnology Institute, Toulouse), led by Dr. Guillermina Hernandez-Raquet

Germany

• Applied Bioinformatics Group (University of Tübingen, Tübingen), led by Prof. Oliver Kohlbacher
• BAM eScience Group (Federal Institute for Materials Research and Testing (BAM), Berlin), led by Dr. Thilo Muth
• Chair of Bioprocess Engineering (Otto von Guericke University, Magdeburg), led by Prof. Udo Reichl
• Functional Microbiology in Animal Science group (Stuttgart), led by Prof. Jana Seifert
• Department of Molecular Systems Biology (Helmholtz-Centre for Environmental Research - UFZ, Leipzig), led by Prof. Martin von Bergen
• Data Analytics & Computational Statistics Group (HPI Potsdam), led by Bernhard Renard
• MF1 - Bioinformatics Group (RKI Berlin), led by Stephan Fuchs
• Microbial Communities (Magdeburg), led by Dr. Dirk Benndorf
• Microbial Proteomics ( University of Greifswald, Greifswald), led by Prof. Katharina Riedel and Prof. Dörte Becher
• Microbiome Biology (Helmholtz-Centre for Environmental Research - UFZ, Leipzig), led by Dr. Nico Jehmlich
• Multidimensional omics data analysis (ISAS e.V., Dortmund), led by Jun.-Prof. Robert Heyer

India

• Micro-omics Lab (CSIR-National Institute of Oceanography, Goa), led by Dr. Samir R. Damare

Italy

• Center for Research and Education on the Microbiota (University of Sassari, Sassari), led by Prof. Sergio Uzzau
• Microbial proteomics - one health section (University of Milan, Milan), led by Prof. Alessio Soggiu
• microbial biochemistry, proteomics and metabolic engineering (University of Torino, Torino), led by Prof. Enrica Pessione

Luxemburg

• Biotechnologies and Environmental Analytics Platform (Belvaux), led by Dr. Jenny Renaut
• Systems Ecology (University of Luxembourg, Luxembourg), led by Prof. Paul Wilmes

The Netherlands

• Center for Proteomics and Metabolomics (Leiden University Medical Center, Leiden), led by Prof. Magnus Palmblad
• Mass Spectrometry of Biomolecules (University of Amsterdam, Amsterdam), led by Dr. Gertjan Kramer
• Microbial proteomics lab (Delft University of Technology, Delft), led by Dr. Martin Pabst

Norway

• Microbial Ecology and Meta-Omics Group (NMBU, Aas), led by Assoc. Prof. Phil Pope and Dr. Magnus Arntzen
• The Protein engineering and proteomics group (NMBU, Aas), led by Prof. Vincent Eijsink

Spain

• Laboratory of Microbiology (University of the Balearic Islands, Palma), led by Dr. Joseph Christie-Oleza
• Microbiota in infant development (University of Granada, Granada), led by Dr. Antonio Suarez
• Microorganism - Host Interaction. Human Proteome Project (Universidad Complutense de Madrid, Madrid), led by dr. Concha Gil
• Molecular Oncology and Pathology Lab (Hospital Universitario La Paz, Madrid), led by Dr. Juan Ángel Fresno Vara

Switzerland

• Bioinformatics and Proteogenomics Group (SIB Swiss Institute of Bioinformatics, Wädenswil) led by Dr. Christian Ahrens

United Kingdom

• Environmental Molecular Microbiology Group (University of Sheffield, Sheffield), led by Dr. Ian Lidbury
• Graystock lab (Imperial College London, Ascot), led by Dr. Peter Graystock
• Microbial Systems Engineering (The University of Sheffield, Sheffield), led by Dr. Jags Pandhal
• Molecular Ecotoxicology and Environmental Proteomics (University of Stirling, Stirling), led by Dr. Sabine Matallana Surget
• Proteomics team (EMBL-EBI, Hinxton), led by Dr. Juan Antonio Vizcaino
• Roslin Proteomics and Metabolomics Facility (University of Edinburgh, Edinburgh), led by Dr. Dominic Kurian

United State of America

• Bhatt lab (Stanford University, Stanford), led by Prof. Ami Bhatt
• Bioanalysis and Omics Center, Analytical Resources Core, (Colorado State University, Fort Collins, CO), led by Dr. Corey Broeckling
• Bioanalytical Mass Spectrometry (Oak Ridge National Laboratory, Oak Ridge, TN), led by Dr. Robert L. Hettich
• Biochemical and Exposure Science Group (NIST-Charleston, Charleston, SC), led by Dr. Benjamin Neely
• Bioinformatics lab (Indiana University, Bloomington, IN), led by Dr. Yuzhen Ye
• Computational Omics Lab (Indiana University, Bloomington, IN), led by Prof. Haixu Tang
• Gastrointestinal Barrier Function Laboratory (Mayo Clinic, Rochester, MN), led by Dr. Madhusudan Grover
• Griffin Research Group/Galaxy-P (University of Minnesota, Minneapolis, MN), led by Dr. Pratik Jagtap and Prof. Timothy Griffin
• Kleiner Lab (North Carolina State University, Raleigh, NC), led by Dr. Manuel Kleiner
• Nunn Lab- Environmental Proteomics (University of Washington), led by Prof. Brook Nunn
• Nutritional Immunology (Arkansas Children’s Nutrition Center, Little Rock, AR), led by Dr. Laxmi Yeruva
• RAW lab (UNCC, Charlotte, NC), led by Dr. Richard Allen White III
• Saeed Lab (FIU, Miami, FL), led by Prof. Fahad Saeed
• Saito Lab (Woods Hole Oceanographic Institution, Massachusetts), led by Prof. Mak Saito